Soybean transgenic event mon 87708 and methods of use thereof

ABSTRACT

The invention provides a transgenic soybean event MON 87708 plant and plants, plant cells, seeds, plant parts, and commodity products derived from event MON 87708. The invention also provides polynucleotides specific for event MON 87708 and plants, plant cells, seeds, plant parts, and commodity products comprising polynucleotides specific for event MON 87708. The invention also provides methods related to event MON 87708.

CROSS REFERENCE TO RELATED APPLICATIONS

This application claims the benefit of U.S. Provisional Application No.61/243,227 filed Sep. 17, 2009, which is herein incorporated byreference in its entirety.

INCORPORATION OF SEQUENCE LISTING

The sequence listing that is contained in the file named“55544-0001_seqlisting.txt”, which is 19.5 kilobytes (size as measuredin Microsoft Windows®) and was created on Aug. 13, 2010, is filedherewith by electronic submission and is incorporated by referenceherein.

FIELD OF THE INVENTION

The invention relates to transgenic Glycine max event MON 87708. Theevent exhibits tolerance to dicamba herbicide. The invention alsorelates to plants, plant parts, plant seeds, plant cells, agriculturalproducts, and methods related to event MON 87708 and provides nucleotidemolecules that are unique to the event and were created in connectionwith the insertion of transgenic DNA into the genome of a Glycine maxplant.

BACKGROUND OF THE INVENTION

Soybean (Glycine max) is an important crop in many areas of the world,and the methods of biotechnology have been applied to this crop in orderto produce soybean with desirable traits. One such desirable trait isherbicide tolerance. The expression of an herbicide tolerance transgenein a plant can confer the desirable trait of herbicide tolerance on theplant, but expression of the transgene may be influenced by thechromosomal location and the genomic result of the transgene insertion.For example, it has been observed in plants that there often isvariation in the level and pattern of transgene expression amongindividual events that differ in the chromosomal insertion site of thetransgene but are otherwise identical. There may also be undesirableand/or desirable phenotypic or agronomic differences between events.Because of this, it is often necessary to produce and analyze a largenumber of individual plant transformation events in order to select anevent having both the desirable trait and the optimal phenotypic andagricultural characteristics necessary to make it suitable forcommercial purposes. Such selection often requires greenhouse and fieldtrials with many events over multiple years, in multiple locations, andunder a variety of conditions so that a significant amount of agronomic,phenotypic, and molecular data may be collected. The resulting data andobservations must then be analyzed by teams of scientists andagronomists with the goal of selecting a commercially suitable event.Such an event, once selected, may then be used for introgressing thedesirable trait into other genetic backgrounds using plant breedingmethods, and thus producing a number of different crop varieties thatcontain the desirable trait and are suitably adapted to specific localgrowing conditions.

SUMMARY OF THE INVENTION

The invention provides transgenic soybean plants designated event MON87708, which exhibit commercially acceptable tolerance to applicationsof dicamba herbicide, having representative seed deposited with AmericanType Culture Collection (ATCC) with Accession No. PTA-9670. Theinvention also provides novel DNA molecules related to soybean event MON87708 and methods of using these molecules. The invention also providesseeds, progeny, plant parts, cells, and commodity products of soybeanevent MON 87708. The invention also provides methods of using soybeanevent MON 87708 and methods of producing dicamba tolerant soybean.

The invention provides recombinant DNA molecules related to soybeanevent MON 87708. These recombinant DNA molecules may comprise nucleotidemolecules having a nucleotide sequence representing a region of thegenomic DNA flanking the transgene insertion, and/or a region of thetransgene insertion, and/or a contiguous sequence of any of theseregions such as a region of the junction between the transgene insertionand flanking genomic DNA of soybean event MON 87708. The invention alsoprovides DNA molecules useful as primers and probes diagnostic forsoybean event MON 87708 and amplicons diagnostic for the presence ofsoybean event MON 87708. Soybean plants, plant cells, plant parts,commodity products, progeny, and seeds comprising these molecules arealso disclosed.

The invention provides methods, compositions, and kits useful fordetecting the presence and/or absence of DNA derived from soybean eventMON 87708 and thus the presence and/or absence of the event. Theinvention provides a method for detection of MON 87708 by contacting asample comprising DNA with a primer set that when used in a nucleic acidamplification reaction with genomic DNA from soybean event MON 87708produces an amplified DNA diagnostic for soybean event MON 87708,performing a nucleic acid amplification reaction thereby producing theamplified DNA, and detecting the presence and/or absence of theamplified DNA. The invention also provides a method for detection of MON87708 by contacting a sample comprising DNA with a probe that when usedin a hybridization reaction with DNA from soybean event MON 87708hybridizes to a DNA molecule specific for soybean event MON 87708,performing a hybridization reaction, and detecting the hybridization ofthe probe to the DNA molecule. Kits comprising the methods andcompositions of the invention useful for detecting the presence of DNAderived from soybean event MON 87708 are also provided.

The invention provides a soybean plant, seed, plant cell, progeny plant,plant part, or commodity product derived from a plant, plant cell, orseed of soybean event MON 87708. The invention also provides a soybeanplant, seed, plant cell, progeny plant, plant part, or commodity productcomprising a recombinant DNA molecule having a nucleotide sequenceselected from the group consisting of SEQ ID NO: 1-8, and complementsand fragments thereof. The invention also provides a soybean plant,seed, plant cell, progeny plant, plant part, or commodity productderived from the plant or seed of soybean event MON 87708 and comprisinga recombinant DNA molecule that produces an amplified DNA moleculecomprising SEQ ID NO: 1, SEQ ID NO: 2, SEQ ID NO: 7, and/or SEQ ID NO: 8in a DNA amplification method.

The invention provides a method for controlling weeds in a field byplanting soybean event MON 87708 and then applying an effective dose ofdicamba herbicide capable of controlling the weeds without injuring thesoybean event MON 87708 plants. The invention also provides a method forcontrolling weeds in a field by applying an effective dose of dicambaherbicide to control weeds in a field and then planting soybean eventMON 87708 in the field. The invention also provides a method forproducing soybean seed essentially free of the seeds of toxic weedspecies by planting seeds of a dicamba tolerant soybean variety MON87708 in a field, applying a post-emergence effective dose of dicambaherbicide sufficient to kill the toxic weed species to the field, andharvesting seed from the field.

The invention provides methods of producing a soybean plant and/or seedthat tolerates application of dicamba herbicide by sexually crossing asoybean event MON 87708 plant comprising SEQ ID NO: 1, SEQ ID NO: 2, SEQID NO: 7, and/or SEQ ID NO: 8 with a second soybean plant, therebyproducing seed, growing the seed to produce progeny plants, treating theprogeny plants with dicamba, and selecting a progeny plant that istolerant to dicamba. The methods may also include selfing the selectedprogeny plant to produce a plurality of second generation progeny plantsand selecting from these a dicamba tolerant plant. The methods may alsoinclude sexually crossing the selected progeny plant with anothersoybean plant to produce seed, growing the seed to produce a secondgeneration of progeny plants, treating the second generation of progenyplants with dicamba, and selecting a second generation progeny plantthat is tolerant to dicamba. The invention provides methods of producinga soybean plant and/or seed that tolerates application of dicambaherbicide by selfing a dicamba tolerant soybean event MON 87708 plantcomprising SEQ ID NO: 1, SEQ ID NO: 2, SEQ ID NO: 7, and/or SEQ ID NO:8, thereby producing seed, growing the seed to produce progeny plants,treating the progeny plants with dicamba; and selecting a progeny plantthat is tolerant to dicamba.

The invention provides methods of determining the zygosity of a soybeanevent MON 87708 plant or seed comprising contacting a soybean DNA samplewith a primer set comprising SEQ ID NO: 12, SEQ ID NO: 13, and SEQ IDNO: 14 and a probe set comprising SEQ ID NO: 15 and SEQ ID NO: 16; thenperforming a nucleic acid amplification reaction with the sample, primerset, and probe set; then detecting in then nucleic acid amplificationreaction a first fluorescent signal that is diagnostic for event MON87708 and a second fluorescent signal different from the firstfluorescent signal and that is diagnostic for native soybean genomic DNAcorresponding to the location of insertion of the event MON 87708transgene; and analyzing the presence and/or absence of the firstfluorescent signal and the second fluorescent signal in the nucleic acidamplification reaction, wherein the presence of both fluorescent signalsindicates the sample is heterozygous for event MON 87708 and thepresence of only the first fluorescent signal indicates the sample ishomozygous for event MON 87708.

The invention also provides a soybean plant, seed, plant cell, or plantpart comprising soybean haplotype region on linkage group 9 atapproximately map position 143.5 comprising a dicamba tolerance gene andfurther defined by haplotype window 19743 and 19767, and methods ofusing the same. The foregoing and other aspects of the invention willbecome more apparent from the following detailed description.

BRIEF DESCRIPTION OF THE DRAWINGS

FIG. 1 illustrates the organization of the transgenic insert in thegenome of soybean event MON 87708; [A] corresponds to the relativeposition of SEQ ID NO: 1, which is sixty nucleotides of the junctionbetween the soybean genomic DNA and the 5′ portion of the transgeneinsert DNA; [A′] corresponds to the relative position of SEQ ID NO: 7,which is one hundred nucleotides of the junction between the soybeangenomic DNA and the 5′ portion of the transgene insert DNA; [B]corresponds to the relative position of SEQ ID NO: 2, which is sixtynucleotides of the junction between the soybean genomic DNA and the 3′portion of the transgene insert DNA; [B′] corresponds to the relativeposition of SEQ ID NO: 8, which is one hundred nucleotides of thejunction between the soybean genomic DNA and the 3′ portion of thetransgene insert DNA; [C] corresponds to the relative position of SEQ IDNO: 3, which is the soybean genome sequence flanking the arbitrarilyassigned/designated 5′ end of the expression cassette integrated intothe genome in event MON 87708; [D] corresponds to the relative positionof SEQ ID NO: 4, which is the soybean genome sequence flanking thearbitrarily assigned/designated 3′ end of the expression cassetteintegrated into the genome in event MON 87708; [E] represents thevarious elements comprising SEQ ID NO: 5 and is the sequence of theexpression cassette inserted into the genome of the event MON 87708; and[F] represents the contiguous sequence (provided as SEQ ID NO: 6)comprising, as represented in the FIGURE from left to right, SEQ ID NO:3, SEQ ID NO: 5 and SEQ ID NO: 4, in which SEQ ID NO: 1, SEQ ID NO: 2,SEQ ID NO: 7, and SEQ ID NO: 8 are included, as these sequences arepresent in the genome in event MON 87708.

BRIEF DESCRIPTION OF THE SEQUENCES

SEQ ID NO: 1 is a sixty nucleotide sequence representing the 5′ junctionbetween the soybean genomic DNA and the integrated transgenic expressioncassette. SEQ ID NO: 1 is positioned in SEQ ID NO: 6 at nucleotideposition 1097-1156.

SEQ ID NO: 2 is a sixty nucleotide sequence representing the 3′ junctionbetween the soybean genomic DNA and the integrated transgenic expressioncassette. SEQ ID NO: 2 is positioned in SEQ ID NO: 6 at nucleotideposition 4100-4159.

SEQ ID NO: 3 is the 5′ sequence flanking the inserted DNA of soybeanevent MON 87708 up to and including a region of transgene DNA insertion.

SEQ ID NO: 4 is the 3′ sequence flanking the inserted DNA of soybeanevent MON 87708 up to and including a region of transgene DNA insertion.

SEQ ID NO: 5 is the sequence of the integrated transgenic expressioncassette.

SEQ ID NO: 6 is the nucleotide sequence representing the contig of the5′ sequence flanking the inserted DNA of soybean event MON 87708 (SEQ IDNO: 3), the sequence of the inserted DNA (SEQ ID NO: 5), and the 3′sequence flanking the inserted DNA of soybean event MON 87708 (SEQ IDNO: 4) and includes SEQ ID NO: 1, SEQ ID NO: 2, SEQ ID NO: 7, and SEQ IDNO: 8.

SEQ ID NO: 7 is a one hundred nucleotide sequence representing the 5′junction between the soybean genomic DNA and the integrated transgenicexpression cassette.

SEQ ID NO: 8 is a one hundred nucleotide sequence representing the 3′junction between the soybean genomic DNA and the integrated transgenicexpression cassette.

SEQ ID NO: 9 is the sequence of a primer referred to as Primer SQ13570and used to identify soybean event MON 87708. It is complimentary to theinserted expression cassette at the region close to the 3′ transgeneinsertion border. A PCR amplicon produced from a TAQMAN® (PE AppliedBiosystems, Foster City, Calif.) assay using the combination of primersSQ13570 and SQ13571 (SEQ ID NO: 10) is a positive result for thepresence of the event MON 87708.

SEQ ID NO: 10 is the sequence of a primer referred to as Primer SQ13571and used to identify soybean event MON 87708. It is complimentary to a3′region flanking the inserted expression cassette and close to thetransgene DNA insertion border. A PCR amplicon produced from a TAQMAN®(PE Applied Biosystems, Foster City, Calif.) assay using the combinationof primers SQ13570 (SEQ ID NO: 9) and SQ13571 is a positive result forthe presence of the event MON 87708.

SEQ ID NO: 11 is the sequence of a probe referred to as Probe PB4655 andused to identify soybean event MON 87708. It is complimentary to aregion spanning the 3′ junction of the inserted expression cassette andthe genomic DNA. This probe is a 6-FAM™-labeled syntheticoligonucleotide. Release of a fluorescent signal in an amplificationreaction using primers SQ13570 and SQ13571 (SEQ ID NO: 9-10) incombination with 6-FAM™-labeled probe PB4655 is diagnostic of event MON87708 in a TAQMAN® assay.

SEQ ID NO: 12 is the sequence of a primer referred to as Primer SQ20632and used to identify MON 87708 event zygosity.

SEQ ID NO: 13 is the sequence of a primer referred to as Primer SQ20636and used to identify soybean wild-type and MON 87708 event zygosity.

SEQ ID NO: 14 is the sequence of a primer referred to as Primer SQ20637and used to identify soybean wild-type zygosity.

SEQ ID NO: 15 is the sequence of a probe referred to as Probe PB10130and used for a MON 87708 event zygosity assay.

SEQ ID NO: 16 is the sequence of a probe referred to as Probe PB10131and used for a soybean wild-type zygosity assay.

DETAILED DESCRIPTION

The following definitions and methods are provided to better define theinvention and to guide those of ordinary skill in the art in thepractice of the invention. Unless otherwise noted, terms are to beunderstood according to conventional usage by those of ordinary skill inthe relevant art.

The invention provides a transgenic soybean event MON 87708 thatexhibits commercially acceptable tolerance to applications of dicambaherbicide. The event comprises a single insertion of transgenic DNA intothe chromosome/genome of the soybean germplasm. An “event” is producedby: (i) transformation of a plant cell with a nucleic acid constructthat includes a transgene of interest, (ii) regeneration of a populationof plants resulting from the insertion of the transgene into the genomeof the plant, and (iii) selection of a particular plant characterized byinsertion of the transgene into a particular location in the plant'sgenome. The term “event” refers to the original transformant thatincludes the transgene inserted into the particular location in theplant's genome. The term “event” also refers to progeny of thetransformant that include the transgene inserted into the particularlocation in the plant's genome. Such progeny may be produced by a sexualoutcross between the transformant, or its progeny, and another plant.Such other plant may be a transgenic plant comprising the same ordifferent transgene and/or a nontransgenic plant, such as one from adifferent variety. Even after repeated back-crossing to a recurrentparent, the inserted DNA and flanking DNA from the transformed parent ispresent in the progeny of the cross at the same genomic location.

As used herein, the term “soybean” means Glycine max and includes allplant varieties that can be bred with soybean, including wild soybeanspecies as well as those plants belonging to Glycine that permitbreeding between species.

The term “event” also refers to a DNA molecule from the originaltransformant comprising the inserted DNA and the flanking soybeangenomic DNA immediately adjacent to either side of the inserted DNA.This DNA molecule is created by the act of inserting the transgenic DNAinto the genome of the soybean plant, i.e., by the act oftransformation. This DNA molecule therefore comprises a nucleotidesequence that is both specific to the event and that is unique to thegenome of the soybean plant into which the transgenic DNA has beeninserted, in that this nucleotide sequence contains both the sequence ofa particular region of soybean genomic DNA and of the transgenic DNAinsert. The arrangement of the inserted DNA in soybean event MON 87708in relation to the surrounding soybean plant genome DNA is thereforespecific and unique for soybean event MON 87708. This DNA molecule isalso an integral part of the soybean chromosome of event MON 87708 andas such is static in the plant and may be passed on to progeny of theplant.

Event MON 87708 comprises a transgene that confers tolerance toapplications of dicamba herbicide to the soybean plant. “Dicamba” refersto 3,6-dichloro-2-methoxybenzoic acid. Dicamba is a synthetic auxinherbicide useful for controlling broadleaf weeds. Soybean plants weretransformed with dicamba mono-oxygenase (DMO), an enzyme cloned fromStenotrophomonas maltophilia which is commonly found in soilrhizosphere. Dicamba mono-oxygenase is an enzyme that catalyzes thedeactivation of dicamba via an O-demethylation reaction to thenonherbicidal compound 3,5-dichlorosalicylic acid. In some areas of theworld toxic weed species seeds may contaminate harvested soybean seedsthat can affect the health and nutrition of animals fed the contaminatedsoybean commodity products. These plants can be eliminated from asoybean field by treatment with a dicamba herbicide. Members of thisgroup of toxic weeds include Cardaria spp, Heliotropium spp, Centaureaspp., Senecio spp., Crotalaria spp., Solanum spp., Xanthium spp.,Amsinckia spp., Cassia spp., Sesbania spp., Datura spp., Ricinus spp.,Argemone spp., Corchorus spp., Impomoea spp., and Echium spp.

As used herein, the term “recombinant” refers to a form of DNA and/orprotein and/or an organism that would not normally be found in natureand as such was created by human intervention. Such human interventionmay produce a recombinant DNA molecule and/or a recombinant plant. Asused herein, a “recombinant DNA molecule” is a DNA molecule comprising acombination of DNA molecules that would not naturally occur together andis the result of human intervention, e.g., a DNA molecule that iscomprised of a combination of at least two DNA molecules heterologous toeach other, and/or a DNA molecule that is artificially synthesized andcomprises a polynucleotide sequence that deviates from thepolynucleotide sequence that would normally exist in nature, and/or aDNA molecule that comprises a transgene artificially incorporated into ahost cell's genomic DNA and the associated flanking DNA of the hostcell's genome. An example of a recombinant DNA molecule is a DNAmolecule described herein resulting from the insertion of the transgeneinto the soybean genomic DNA, which may ultimately result in theexpression of a recombinant RNA and/or protein molecule in thatorganism. As used herein, a “recombinant plant” is a plant that wouldnot normally exist in nature, is the result of human intervention, andcontains a transgene and/or heterologous DNA molecule incorporated intoits genome. As a result of such genomic alteration, the recombinantplant is distinctly different from the related wildtype plant. Anexample of a recombinant plant is a soybean plant described herein asEvent MON 87708.

As used herein, the term “transgene” refers to a nucleotide moleculeartificially incorporated into a host cell's genome. Such transgene maybe heterologous to the host cell. The term “transgenic plant” refers toa plant comprising such a transgene.

As used herein, the term “heterologous” refers to a first molecule notnormally found in combination with a second molecule in nature. Forexample, a molecule may be derived from a first species and insertedinto the genome of a second species. The molecule would thus beheterologous to the host and artificially incorporated into a hostcell's genome.

As used herein, the term “chimeric” refers to a single DNA moleculeproduced by fusing a first DNA molecule to a second DNA molecule, whereneither first nor second DNA molecule would normally be found in thatconfiguration, i.e., fused to the other. The chimeric DNA molecule isthus a new DNA molecule not otherwise normally found in nature.

The invention provides DNA molecules and their corresponding nucleotidesequences. As used herein, the term “DNA”, “DNA molecule”, “nucleotidemolecule” refers to a DNA molecule of genomic or synthetic origin, i.e.,a polymer of deoxyribonucleotide bases or a polynucleotide molecule,read from the 5′ (upstream) end to the 3′ (downstream) end. As usedherein, the term “DNA sequence”, “nucleotide sequence” or“polynucleotide sequence” refers to the nucleotide sequence of a DNAmolecule. The nomenclature used herein is that required by Title 37 ofthe United States Code of Federal Regulations §1.822 and set forth inthe tables in WIPO Standard ST.25 (1998), Appendix 2, Tables 1 and 3. Byconvention, the nucleotide sequences of the invention provided as SEQ IDNO: 1-8 and fragments thereof are disclosed with reference to only onestrand of the two complementary nucleotide sequence strands. Byimplication, the complementary sequences (i.e. the sequences of thecomplementary strand), also referred to in the art as the reversecomplementary sequences, are within the scope of the invention and areexpressly intended to be within the scope of the subject matter claimed.

The nucleotide sequence corresponding to the complete nucleotidesequence of the inserted transgenic DNA and substantial segments of thesoybean genome DNA flanking either end of the inserted transgenic DNA isprovided herein as SEQ ID NO: 6. A subsection of this is the insertedtransgenic DNA provided as SEQ ID NO: 5. The nucleotide sequence of thesoybean genome DNA physically linked by phosphodiester bond linkage toand therefore flanking the 5′ end of the inserted transgenic DNA is setforth as shown in SEQ ID NO: 3. The nucleotide sequence of the soybeangenome DNA physically linked by phosphodiester bond linkage to andtherefore flanking the 3′ end of the inserted transgenic DNA is setforth as shown in SEQ ID NO: 4.

The soybean event MON 87708 further comprises two regions, one spanningthe 5′ location and one spanning the 3′ location where the transgenicDNA is inserted into the genomic DNA, referred to herein as the 5′ and3′ junction, respectively. A “junction sequence” or “junction region”refers to the DNA sequence and/or corresponding DNA molecule that spansthe inserted transgenic DNA and the adjacent flanking genomic DNA. Thejunction sequences may be arbitrarily represented by the two 60nucleotide sequences provided as SEQ ID NO: 1 and SEQ ID NO: 2, eachrepresenting 30 nucleotides of the flanking genomic DNA adjacent to andcontiguous with 30 nucleotides of insert DNA. Alternatively, thejunction sequences may be arbitrarily represented by the two 100nucleotide sequences provided as SEQ ID NO: 7 and SEQ ID NO: 8, eachrepresenting 50 nucleotides of the flanking genomic DNA adjacent to andcontiguous with 50 nucleotides of insert DNA. These nucleotides areconnected by phosphodiester linkage and in soybean event MON 87708 arepresent as part of the genome. In soybean the identification of one ormore of SEQ ID NO: 1, SEQ ID NO: 2, SEQ ID NO: 7, and SEQ ID NO: 8 in asample derived from a soybean plant, seed, or plant part isdeterminative that the DNA was obtained from soybean event MON 87708 andis diagnostic for the presence in a sample of DNA from soybean event MON87708. The invention thus provides a DNA molecule that contains at leastthe nucleotide sequence as set forth in SEQ ID NO: 1, SEQ ID NO: 2, SEQID NO: 7, and/or SEQ ID NO: 8. Any segment of DNA derived fromtransgenic soybean event MON 87708 that is sufficient to include SEQ IDNO: 1, SEQ ID NO: 2, SEQ ID NO: 7, and/or SEQ ID NO: 8 is within thescope of The invention. In addition, any polynucleotide comprising asequence complementary to any of the sequences described within thisparagraph is within the scope of the invention. FIG. 1 illustrates thephysical arrangement of SEQ ID NO: 1-5 and 7-8 relative to SEQ ID NO: 6arranged from 5′ to 3′.

The invention provides exemplary DNA molecules that can be used eitheras primers or probes for diagnosing the presence of DNA derived fromsoybean plant event MON 87708 in a sample. Such primers or probes arespecific for a target nucleic acid sequence and as such are useful forthe identification of soybean event MON 87708 nucleic acid sequence bythe methods of the invention described herein.

A “primer” is typically a highly purified, isolated polynucleotide thatis designed for use in specific annealing or hybridization methods thatinvolve thermal amplification. A pair of primers may be used withtemplate DNA, such as a sample of soybean genomic DNA, in a thermalamplification, such as polymerase chain reaction (PCR), to produce anamplicon, where the amplicon produced from such reaction would have aDNA sequence corresponding to sequence of the template DNA locatedbetween the two sites where the primers hybridized to the template. Asused herein, an “amplicon” is a piece or fragment of DNA that has beensynthesized using amplification techniques. An amplicon of the inventioncomprises at least SEQ ID NO: 1, SEQ ID NO: 2, SEQ ID NO: 7, and/or SEQID NO: 8. A primer is typically designed to hybridize to a complementarytarget DNA strand to form a hybrid between the primer and the target DNAstrand, and the presence of the primer is a point of recognition by apolymerase to begin extension of the primer (i.e., polymerization ofadditional nucleotides into a lengthening nucleotide molecule) using asa template the target DNA strand. Primer pairs, as used in theinvention, are intended to refer to use of two primers binding oppositestrands of a double stranded nucleotide segment for the purpose ofamplifying linearly the polynucleotide segment between the positionstargeted for binding by the individual members of the primer pair,typically in a thermal amplification reaction or other conventionalnucleic-acid amplification methods. Exemplary DNA molecules useful asprimers are provided as SEQ ID NO: 9-10. The primer pair provided as SEQID NO: 9 and SEQ ID NO: 10 are useful as a first DNA molecule and asecond DNA molecule that is different from the first DNA molecule, andboth are each of sufficient length of contiguous nucleotides of eitherSEQ ID NO: 4, SEQ ID NO: 5, or SEQ ID NO: 6 to function as DNA primersthat, when used together in a thermal amplification reaction withtemplate DNA derived from soybean event MON 87708, produce an ampliconcomprising SEQ ID NO: 2.

A “probe” is an isolated nucleic acid that is complementary to a strandof a target nucleic acid. Probes according to the invention include notonly deoxyribonucleic or ribonucleic acids but also polyamides and otherprobe materials that bind specifically to a target DNA sequence and thedetection of such binding can be useful in diagnosing, discriminating,determining, or confirming the presence of that target DNA sequence in aparticular sample. A probe may be attached to a conventional detectablelabel or reporter molecule, e.g., a radioactive isotope, ligand,chemiluminescent agent, or enzyme. An exemplary DNA molecule useful as aprobe is provided as SEQ ID NO: 11.

Probes and primers according to the invention may have complete sequenceidentity with the target sequence, although primers and probes differingfrom the target sequence that retain the ability to hybridizepreferentially to target sequences may be designed by conventionalmethods. In order for a nucleic acid molecule to serve as a primer orprobe it need only be sufficiently complementary in sequence to be ableto form a stable double-stranded structure under the particular solventand salt concentrations employed. Any conventional nucleic acidhybridization or amplification method can be used to identify thepresence of transgenic DNA from soybean event MON 87708 in a sample.Probes and primers are generally at least about 11 nucleotides, at leastabout 18 nucleotides, at least about 24 nucleotides, or at least about30 nucleotides or more in length. Such probes and primers hybridizespecifically to a target DNA sequence under stringent hybridizationconditions. Conventional stringency conditions are described by Sambrooket al., 1989, and by Haymes et al., In: Nucleic Acid Hybridization, APractical Approach, IRL Press, Washington, D.C. (1985). As used herein,two nucleic acid molecules are capable of specifically hybridizing toone another if the two molecules are capable of forming ananti-parallel, double-stranded nucleic acid structure. A nucleic acidmolecule is the “complement” of another nucleic acid molecule if theyexhibit complete complementarity. As used herein, molecules exhibit“complete complementarity” when every nucleotide of one of the moleculesis complementary to a nucleotide of the other. Two molecules are“minimally complementary” if they can hybridize to one another withsufficient stability to permit them to remain annealed to one anotherunder at least conventional “low-stringency” conditions. Similarly, themolecules are “complementary” if they can hybridize to one another withsufficient stability to permit them to remain annealed to one anotherunder conventional “high-stringency” conditions. Departures fromcomplete complementarity are therefore permissible, as long as suchdepartures do not completely preclude the capacity of the molecules toform a double-stranded structure.

As used herein, the term “isolated” refers to at least partiallyseparating a molecule from other molecules normally associated with itin its native or natural state. In one embodiment, the term “isolated”refers to a DNA molecule that is at least partially separated from thenucleic acids which normally flank the DNA molecule in its native ornatural state. Thus, DNA molecules fused to regulatory or codingsequences with which they are not normally associated, for example asthe result of recombinant techniques, are considered isolated herein.Such molecules are considered isolated even when integrated into thechromosome of a host cell or present in a nucleic acid solution withother DNA molecules.

Any number of methods well known to those skilled in the art can be usedto isolate and manipulate a DNA molecule, or fragment thereof, disclosedin the invention. For example, PCR (polymerase chain reaction)technology can be used to amplify a particular starting DNA moleculeand/or to produce variants of the original molecule. DNA molecules, orfragment thereof, can also be obtained by other techniques such as bydirectly synthesizing the fragment by chemical means, as is commonlypracticed by using an automated oligonucleotide synthesizer.

The DNA molecules and corresponding nucleotide sequences provided hereinare therefore useful for, among other things, identifying soybean eventMON 87708, selecting plant varieties or hybrids comprising soybean eventMON 87708, detecting the presence of DNA derived from the transgenicsoybean event MON 87708 in a sample, and monitoring samples for thepresence and/or absence of soybean event MON 87708 or plant partsderived from soybean event MON 87708.

The invention provides soybean plants, progeny, seeds, plant cells,plant parts (such as pollen, ovule, pod, flower tissue, root tissue,stem tissue, and leaf tissue), and commodity products. These plants,progeny, seeds, plant cells, plant parts, and commodity products containa detectable amount of a polynucleotide of the invention, i.e., such asa polynucleotide having at least one of the sequences provided as SEQ IDNO: 1-8. Plants, progeny, seeds, plant cells, and plant parts of theinvention may also contain one or more additional transgenes. Suchtransgene may be any nucleotide sequence encoding a protein or RNAmolecule conferring a desirable trait including but not limited toincreased insect resistance, increased water use efficiency, increasedyield performance, increased drought resistance, increased seed quality,improved nutritional quality, and/or increased herbicide tolerance, inwhich the desirable trait is measured with respect to a soybean plantlacking such additional transgene.

The invention provides soybean plants, progeny, seeds, plant cells, andplant part such as pollen, ovule, pod, flower, root or stem tissue, andleaves derived from a transgenic soybean plant event MON 87708. Arepresentative sample of soybean event MON 87708 seed has been depositedaccording to the Budapest Treaty for the purpose of enabling theinvention. The repository selected for receiving the deposit is theAmerican Type Culture Collection (ATCC) having an address at 10801University Boulevard, Manassas, Va. USA, Zip Code 20110. The ATCCrepository has assigned the accession No. PTA-9670 to the event MON87708 seed.

The invention provides a microorganism comprising a DNA molecule havingSEQ ID NO: 1 and SEQ ID NO: 2 present in its genome. An example of sucha microorganism is a transgenic plant cell. Microorganisms, such as aplant cell of The invention, are useful in many industrial applications,including but not limited to: (i) use as research tool for scientificinquiry or industrial research; (ii) use in culture for producingendogenous or recombinant carbohydrate, lipid, nucleic acid, or proteinproducts or small molecules that may be used for subsequent scientificresearch or as industrial products; and (iii) use with modern planttissue culture techniques to produce transgenic plants or plant tissuecultures that may then be used for agricultural research or production.The production and use of microorganisms such as transgenic plant cellsutilizes modern microbiological techniques and human intervention toproduce a man-made, unique microorganism. In this process, recombinantDNA is inserted into a plant cell's genome to create a transgenic plantcell that is separate and unique from naturally occurring plant cells.This transgenic plant cell can then be cultured much like bacteria andyeast cells using modern microbiology techniques and may exist in anundifferentiated, unicellular state. The new plant cell's geneticcomposition and phenotype is a technical effect created by theintegration of the heterologous DNA into the genome of the cell. Anotheraspect of the invention is a method of using a microorganism of theinvention. Methods of using microorganisms of the invention, such astransgenic plant cells, include (i) methods of producing transgeniccells by integrating recombinant DNA into the genome of the cell andthen using this cell to derive additional cells possessing the sameheterologous DNA; (ii) methods of culturing cells that containrecombinant DNA using modern microbiology techniques; (iii) methods ofproducing and purifying endogenous or recombinant carbohydrate, lipid,nucleic acid, or protein products from cultured cells; and (iv) methodsof using modern plant tissue culture techniques with transgenic plantcells to produce transgenic plants or transgenic plant tissue cultures.

Plants of the invention may pass along the event DNA, including thetransgene, to progeny. As used herein, “progeny” includes any plant,seed, plant cell, and/or regenerable plant part comprising the event DNAderived from an ancestor plant and/or a polynucleotide having at leastone of the sequences provided as SEQ ID NO: 1 and SEQ ID NO: 2. Plants,progeny, and seeds may be homozygous or heterozygous for the transgene.Progeny may be grown from seeds produced by a soybean event MON 87708plant and/or from seeds produced by a plant fertilized with pollen froma soybean event MON 87708 plant.

Progeny plants may be self-pollinated (also known as “selfing”) togenerate a true breeding line of plants, i.e., plants homozygous for thetransgene. Selfing of appropriate progeny can produce plants that arehomozygous for both added, exogenous genes.

Alternatively, progeny plants may be outcrossed, e.g., bred with anotherunrelated plant, to produce a varietal or a hybrid seed or plant. Theother unrelated plant may be transgenic or nontransgenic. A varietal orhybrid seed or plant of the invention may thus be derived by crossing afirst parent that lacks the specific and unique DNA of the soybean eventMON 87708 with a second parent comprising soybean event MON 87708,resulting in a hybrid comprising the specific and unique DNA of thesoybean event MON 87708. Each parent can be a hybrid or aninbred/varietal, so long as the cross or breeding results in a plant orseed of the invention, i.e., a seed having at least one allelecontaining the specific and unique DNA of soybean event MON 87708 and/orSEQ ID NO: 1 and SEQ ID NO: 2. Two different transgenic plants may thusbe mated to produce hybrid offspring that contain two independentlysegregating, added, exogenous genes. For example, the MON 87708 dicambatolerant soybean can be crossed with other transgenic soybean plant toproduce a plant having the characteristics of both transgenic parents.One example of this would be a cross of MON 87708 dicamba tolerantsoybean with a plant having one or more additional traits such asherbicide tolerance (e.g., soybean event 40-3-2 or soybean eventMON89788 (U.S. Patent Application Publication No. 20060282915)), insectcontrol (e.g. soybean event MON87701 (U.S. Patent ApplicationPublication No. 20090130071)), and/or other desirable traits (e.g.enhanced oil composition such as soybean event MON87769 (PCT PatentPublication WO2009102873)), resulting in a progeny plant or seed that istolerant to dicamba and has one or more additional traits. Herbicidesfor which transgenic plant tolerance has been demonstrated and themethod of the invention can be applied, include but are not limited to:glyphosate, glufosinate, sulfonylureas, imidazolinones, bromoxynil,delapon, cyclohexanedione, protoporphyrionogen oxidase inhibitors, andisoxasflutole herbicides. Nucleotide molecules encoding proteinsinvolved in herbicide tolerance are known in the art and include, butare not limited to, a nucleotide molecule encoding: glyphosate-tolerant5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) (see, for example,U.S. Pat. Nos. 5,627,061; 5,633,435; 6,040,497; 5,094,945; 5,804,425;6,248,876; 7,183,110; RE39,247); glyphosate oxidoreductase (GOX) (see,for example, U.S. Pat. No. 5,776,760); glyphosate-n-acetyltransferase(GAT); an herbicide-tolerant acetolactate synthase (ALS, also known asacetohydroxyacid synthase (AHAS)) for tolerance to sulfonylureas,imidazolinones, triazolopyrimidines, pyrimidinyl oxybenzoates,sulfonylamino carbonyl triazolinones, and/or heteroaryl ethers; anherbicide-tolerant acetyl coenzyme A carboxylase (ACCase) orR-2,4-dichlorophenoxypropionate dioxygenase (rdpA) for tolerance to anaryloxyphenoxypropionate (AOPP) (such as haloxyfop, quizalofop,dichlorofop, and diclofop); a detoxification protein such as a 2,4-Ddioxygenase (tfdA), R-2,4-dichlorophenoxypropionate dioxygenase (rdpA),AryloxyAlkanoate Dioxygenase (AAD), and/or S-2,4-dichorprop dioxygenase(sdpA) for tolerance to synthetic auxin herbicides; a bromoxynilnitrilase (Bxn) for Bromoxynil tolerance (see, for example, U.S. Pat.No. 4,810,648); a phytoene desaturase (crtl) for tolerance tonorflurazon; the bialaphos resistance (bar) or phosphinothricinacetyltransferase (PAT) protein (see, for example, U.S. Pat. Nos.5,646,024 and 5,276,268) for tolerance to glufosinate and bialaphos; anda protein for triketone (mezotrione, tembotrione, topromezone,isoxazole) herbicide-tolerance such as tolerant 4-HydroxyPhenylPyruvateDioxygenase (HPPD), a detoxifying cytochrome P450, or an HPPD pathwaybypass such as Artbrobacter globiformis HPP oxidase (HPPO) andPseudomonas acidovorans 4-HPA 1-hydroxylase (HPAH) and NADHoxidoreductase (HPAC).

Back-crossing to a parental plant and out-crossing with a non-transgenicplant are also contemplated, as is vegetative propagation. Descriptionsof other breeding methods that are commonly used for different traitsand crops can be found in one of several references, e.g., Fehr, inBreeding Methods for Cultivar Development, Wilcox J. ed., AmericanSociety of Agronomy, Madison Wis. (1987).

The invention provides a plant part that is derived from soybean eventMON 87708. As used herein, a “plant part” refers to any part of a plantwhich is comprised of material derived from a soybean event MON 87708plant. Plant parts include but are not limited to pollen, ovule, pod,flower, root or stem tissue, fibers, and leaves. Plant parts may beviable, nonviable, regenerable, and/or nonregenerable.

The invention provides a commodity product that is derived from soybeanevent MON 87708. As used herein, a “commodity product” refers to anycomposition or product which is comprised of material derived from asoybean event MON 87708 plant, seed, plant cell, or plant part.Commodity products may be sold to consumers and may be viable ornonviable. Nonviable commodity products include but are not limited tononviable seeds and grains; processed seeds, seed parts, and plantparts; dehydrated plant tissue, frozen plant tissue, and processed planttissue; seeds and plant parts processed for animal feed for terrestrialand/or aquatic animals consumption, oil, meal, flour, flakes, bran,fiber, milk, cheese, paper, cream, wine, and any other food for humanconsumption; and biomasses and fuel products. Viable commodity productsinclude but are not limited to seeds and plant cells. The soybean eventMON 87708 can thus be used to manufacture any commodity producttypically acquired from soybean. Any such commodity product that isderived from the soybean event MON 87708 may contain at least adetectable amount of the specific and unique DNA corresponding tosoybean event MON 87708, and specifically may contain a detectableamount of a polynucleotide containing at least 15 contiguous nucleotidesof SEQ ID NO: 1 or SEQ ID NO: 2. Any standard method of detection fornucleotide molecules may be used, including methods of detectiondisclosed herein. A commodity product is within the scope of theinvention if there is any detectable amount of SEQ ID NO: 1 or SEQ IDNO: 2 in the commodity product.

The plants, progeny, seeds, plant cells, plant parts (such as pollen,ovule, pod, flower, root or stem tissue, and leaves), and commodityproducts of the invention are therefore useful for, among other things,growing plants for the purpose of producing seed and/or plant parts ofsoybean event MON 87708 for agricultural purposes, producing progeny ofsoybean event MON 87708 for plant breeding and research purposes, usewith microbiological techniques for industrial and researchapplications, and sale to consumers.

The invention provides methods for controlling weeds and methods forproducing plants using dicamba herbicide and soybean event MON 87708. Amethod for controlling weeds in a field is provided and consists ofplanting soybean event MON 87708 varietal or hybrid plants in a fieldand applying a herbicidally effective dose of dicamba to the field forthe purpose of controlling weeds in the field without injuring the MON87708 plants. Such application of dicamba herbicide may bepre-emergence, i.e., any time after MON 87708 seed is planted and beforeMON 87708 plants emerge, or post-emergence, i.e., any time after MON87708 plants emerge. Another method for controlling weeds in a field isalso provided and consists of applying an effective dose of dicambaherbicide to control weeds in a field and then planting soybean eventMON 87708 in the field. Such application of dicamba herbicide would bepre-planting, i.e., before MON 87708 seed is planted, and could be doneany time pre-planting including, but not limited to, about 14 dayspre-planting to about 1 day pre-planting. The invention also provides amethod for producing soybean seed essentially free of the seeds of toxicweed species by planting seeds of a dicamba tolerant soybean variety MON87708 in a field, applying a post-emergence effective dose of dicambaherbicide sufficient to kill the toxic weed species to the field, andharvesting seed from the field. A herbicidally effective dose of dicambafor use in the field should consist of a range from about 0.005 poundsper acre to about 8 pounds of dicamba per acre over a growing season.Multiple applications of dicamba may be used over a growing season, forexample, two applications (such as a pre-planting application and apost-emergence application or a pre-emergence application and apost-emergence application) or three applications (such as apre-planting application, a pre-emergence application, and apost-emergence application).

Methods for producing an herbicide tolerant soybean plant comprising theDNA sequences specific and unique to the transgenic event MON 87708 ofthe invention are provided. Transgenic plants used in these methods maybe homozygous or heterozygous for the transgene. Progeny plants producedby these methods may be varietal or hybrid plants; may be grown fromseeds produced by a soybean event MON 87708 plant and/or from seedsproduced by a plant fertilized with pollen from a soybean event MON87708 plant; and may be homozygous or heterozygous for the transgene.Progeny plants may be subsequently self-pollinated to generate a truebreeding line of plants, i.e., plants homozygous for the transgene, oralternatively may be outcrossed, e.g., bred with another unrelatedplant, to produce a varietal or a hybrid seed or plant.

A soybean plant that tolerates application of dicamba herbicide may beproduced by sexually crossing an event MON 87708 plant comprising anucleotide molecule comprising the sequence of SEQ ID NO: 1 and SEQ IDNO: 2 with another soybean plant and thereby producing seed, which isthen grown into progeny plants. These progeny plants may then be treatedwith dicamba herbicide to select for progeny plants that are tolerant todicamba herbicide. Alternatively, these progeny plants may be analyzedusing diagnostic methods to select for progeny plants that contain theevent MON 87708 DNA. The other plant used in the crossing may or may notbe tolerant to dicamba herbicide and may or may not be transgenic. Theprogeny plant and/or seed produced may be varietal or hybrid seed. Inpracticing this method, the step of sexually crossing one plant withanother plant, i.e., cross-pollinating, may be accomplished orfacilitated by human intervention, for example: by human handscollecting the pollen of one plant and contacting this pollen with thestyle or stigma of a second plant; by human hands and/or actionsremoving, destroying, or covering the stamen or anthers of a plant(e.g., by detasseling or by application of a chemical gametocide) sothat natural self-pollination is prevented and cross-pollination wouldhave to take place in order for fertilization to occur; by humanplacement of pollinating insects in a position for “directedpollination” (e.g., by placing beehives in orchards or fields or bycaging plants with pollinating insects); by human opening or removing ofparts of the flower to allow for placement or contact of foreign pollenon the style or stigma (e.g., in soy which naturally has flowers thathinder or prevent cross-pollination, making them naturally obligateself-pollinators without human intervention); by selective placement ofplants (e.g., intentionally planting plants in pollinating proximity);and/or by application of chemicals to precipitate flowering or to fosterreceptivity (of the stigma for pollen).

A soybean plant that tolerates application of dicamba herbicide may beproduced by selfing an event MON 87708 plant comprising a nucleotidemolecule comprising the sequence of SEQ ID NO: 1 and SEQ ID NO: 2 andthereby producing seed, which is then grown into progeny plants. Theseprogeny plants may then be treated with dicamba herbicide to select forprogeny plants that are tolerant to dicamba herbicide. Alternatively,these progeny plants may be analyzed using diagnostic methods to selectfor progeny plants that contain the event MON 87708 DNA. In practicingthis method, the step of sexually crossing one plant with itself, i.e.,self-pollinating or selfing, may be accomplished or facilitated by humanintervention, for example: by human hands collecting the pollen of theplant and contacting this pollen with the style or stigma of the sameplant and then optionally preventing further fertilization of the plant;by human hands and/or actions removing, destroying, or covering thestamen or anthers of other nearby plants (e.g., by detasseling or byapplication of a chemical gametocide) so that natural cross-pollinationis prevented and self-pollination would have to take place in order forfertilization to occur; by human placement of pollinating insects in aposition for “directed pollination” (e.g., by caging a plant alone withpollinating insects); by human manipulation of the flower or its partsto allow for self-pollination; by selective placement of plants (e.g.,intentionally planting plants beyond pollinating proximity); and/or byapplication of chemicals to precipitate flowering or to fosterreceptivity (of the stigma for pollen).

Progeny soybean plants and seeds encompassed by these methods andproduced by using these methods will be distinct from other soybeanplants, for example because the progeny soybean plants and seeds: arerecombinant and as such created by human intervention; are dicambaherbicide tolerant; contain at least one allele that consists of thetransgene DNA of the invention; and/or contain a detectable amount of apolynucleotide sequence selected from the group consisting of SEQ ID NO:1 and SEQ ID NO: 2. A seed may be selected from an individual progenyplant, and so long as the seed comprises SEQ ID NO: 1 and SEQ ID NO: 2,it will be within the scope of the invention.

In practicing the invention, two different transgenic plants can becrossed to produce hybrid offspring that contain two independentlysegregating heterologous genes. Selfing of appropriate progeny canproduce plants that are homozygous for both genes. Back-crossing to aparental plant and out-crossing with a non-transgenic plant are alsocontemplated, as is vegetative propagation. Descriptions of othermethods that are commonly used for different traits and crops can befound in one of several references, e.g., Fehr, in Breeding Methods forCultivar Development, Wilcox J. ed., American Society of Agronomy,Madison Wis. (1987).

The plants and seeds used in the methods disclosed herein may alsocontain one or more additional transgenes. Such transgene may be anynucleotide sequence encoding a protein or RNA molecule conferring adesirable trait including but not limited to increased insectresistance, increased water use efficiency, increased yield performance,increased drought resistance, increased seed quality, improvednutritional quality, and/or increased herbicide tolerance, in which thedesirable trait is measured with respect to a soybean plant lacking suchadditional transgene.

The methods of the invention are therefore useful for, among otherthings, controlling weeds in a field while growing plants for thepurpose of producing seed and/or plant parts of soybean event MON 87708for agricultural or research purposes, selecting for progeny of soybeanevent MON 87708 for plant breeding or research purposes, and producingprogeny plants and seeds of soybean event MON 87708.

The plants, progeny, seeds, plant cells, plant parts (such as pollen,ovule, pod, flower, root or stem tissue, and leaves), and commodityproducts of the invention may be evaluated for DNA composition, geneexpression, and/or protein expression. Such evaluation may be done byusing any standard method such as PCR, northern blotting, southernanalysis, western blotting, immuno-precipitation, and ELISA or by usingthe methods of detection and/or the detection kits provided herein.

Methods of detecting the presence of DNA derived from a soybean cell,tissue, seed, or plant of soybean event MON 87708 in a sample areprovided. One method consists of (i) extracting a DNA sample from atleast one soybean cell, tissue, seed, or plant, (ii) contacting the DNAsample with a primer pair that is capable of producing an amplicon fromevent MON 87708 DNA under conditions appropriate for DNA amplification,(iii) performing a DNA amplification reaction, and then (iv) detectingthe amplicon molecule and/or confirming that the nucleotide sequence ofthe amplicon comprises a nucleotide sequence specific for event MON87708, such as one selected from the group consisting of SEQ ID NO: 1-8.The amplicon should be one that is specific for event MON 87708, such asan amplicon that comprises SEQ ID NO: 1 or SEQ ID NO: 2. The detectionof a nucleotide sequence specific for event MON 87708 in the amplicon isdeterminative and/or diagnostic for the presence of the soybean eventMON 87708 specific DNA in the sample. An example of a primer pair thatis capable of producing an amplicon from event MON 87708 DNA underconditions appropriate for DNA amplification is provided as SEQ ID NO:10-11. Other primer pairs may be readily designed by one of skill in theart and would comprise at least one fragment of SEQ ID NO: 6. Anothermethod of detecting the presence of DNA derived from a soybean cell,tissue, seed, or plant of soybean event MON 87708 in a sample consistsof (i) extracting a DNA sample from at least one soybean cell, tissue,seed, or plant, (ii) contacting the DNA sample with a DNA probe specificfor event MON 87708 DNA, (iii) allowing the probe and the DNA sample tohybridize under stringent hybridization conditions, and then (iv)detecting hybridization between the probe and the target DNA sample. Anexample of the sequence a DNA probe that is specific for event MON 87708DNA is provided as SEQ ID NO: 11. Other probes may be readily designedby one of skill in the art and would comprise at least one fragment ofSEQ ID NO: 6. Detection of probe hybridization to the DNA sample isdiagnostic for the presence of soybean event MON 87708 specific DNA inthe sample. Absence of hybridization is alternatively diagnostic of theabsence of soybean event MON 87708 specific DNA in the sample.

DNA detection kits are provided that are useful for the identificationof soybean event MON 87708 DNA in a sample and can also be applied tomethods for breeding soybean plants containing the appropriate eventDNA. Such kits contain DNA primers and/or probes comprising fragments ofSEQ ID NO: 1-8. One example of such a kit comprises at least one DNAmolecule of sufficient length of contiguous nucleotides of SEQ ID NO: 6to function as a DNA probe useful for detecting the presence and/orabsence of DNA derived from transgenic soybean event MON 87708 in asample. The DNA derived from transgenic soybean event MON 87708 wouldcomprise SEQ ID NO: 1, SEQ ID NO: 2, SEQ ID NO: 7, and/or SEQ ID NO: 8.A DNA molecule sufficient for use as a DNA probe is provided that isuseful for determining, detecting, or diagnosing the presence and/orabsence of soybean event MON 87708 DNA in a sample is provided as SEQ IDNO: 11. Other probes may be readily designed by one of skill in the artand should comprise at least 15 contiguous nucleotides of SEQ ID NO: 6and be sufficiently unique to soybean event MON 87708 DNA in order toidentify DNA derived from the event. Another type of kit comprises aprimer pair useful for producing an amplicon useful for detecting thepresence and/or absence of DNA derived from transgenic soybean event MON87708 in a sample. Such a kit would employ a method comprisingcontacting a target DNA sample with a primer pair as described herein,then performing a nucleic acid amplification reaction sufficient toproduce an amplicon comprising SEQ ID NO: 1, SEQ ID NO: 2, SEQ ID NO: 7,and/or SEQ ID NO: 8, and then detecting the presence and/or absence ofthe amplicon. Such a method may also include sequencing the amplicon ora fragment thereof, which would be determinative of, i.e. diagnosticfor, the presence of the soybean event MON 87708 specific DNA in thetarget DNA sample. Other primer pairs may be readily designed by one ofskill in the art and should comprise at least 15 contiguous nucleotidesof SEQ ID NO: 6 and be sufficiently unique to soybean event MON 87708DNA in order to identify DNA derived from the event.

Nucleic-acid amplification can be accomplished by any of the variousnucleic-acid amplification methods known in the art, including thermalamplification methods. Many techniques are known in the art fordetecting, quantifying, and/or sequencing the amplicon produced by thesemethods. One exemplary technique useful in practicing this invention isTAQMAN® (PE Applied Biosystems, Foster City, Calif.).

The kits and detection methods of the invention are useful for, amongother things, identifying soybean event MON 87708, selecting plantvarieties or hybrids comprising soybean event MON 87708, detecting thepresence of DNA derived from the transgenic soybean event MON 87708 in asample, and monitoring samples for the presence and/or absence ofsoybean event MON 87708 or plant parts derived from soybean event MON87708.

The sequence of the heterologous DNA insert, junction sequences, orflanking sequences from soybean event MON 87708 (with representativeseed samples deposited as ATCC PTA-9670) can be verified (and correctedif necessary) by amplifying such sequences from the event using primersderived from the sequences provided herein followed by standard DNAsequencing of the amplicon or of the cloned DNA.

As used herein, the term “comprising” means “including but not limitedto”.

The following examples are included to demonstrate examples of certainpreferred embodiments of the invention. It should be appreciated bythose of skill in the art that the techniques disclosed in the examplesthat follow represent approaches the inventors have found function wellin the practice of the invention, and thus can be considered toconstitute examples of preferred modes for its practice. However, thoseof skill in the art should, in light of the present disclosure,appreciate that many changes can be made in the specific embodimentsthat are disclosed and still obtain a like or similar result withoutdeparting from the spirit and scope of the invention.

EXAMPLES Example 1 Transformation of Soybean A3525 and MON 87708 EventSelection

The soybean plant MON 87708 was produced by Agrobacterium-mediatedtransformation of soybean. Soybean cells were transformed andregenerated into intact soybean plants and individual plants wereselected from the population of plants that showed integrity of theplant expression cassette and resistance to dicamba. From thispopulation, soybean plant event MON 87708 was selected andcharacterized.

The transgenic dicamba tolerant soybean plant MON 87708 was developedthrough Agrobacterium-mediated transformation of soybean meristem tissueutilizing transformation vector PV-GMHT4355. The method was described inU.S. Pat. No. 6,384,301 (herein incorporated by reference), which allowsfor the generation of transformed plants without utilization of callus.Briefly, meristem tissues were excised from the embryos of germinatedA3525 soybean seed (Asgrow, St Louis, Mo.). After co-culturing withAgrobacterium carrying the vector, the meristems were placed onselection medium containing glyphosate (Monsanto, St Louis, Mo.),carbenicillin disodium salt, cefotaxime sodium salt, and ticarcillindisodium salt/potassium clavulanate mixture to inhibit the growth ofuntransformed plant cells and excess Agrobacterium. The meristems werethen placed in media conducive to shoot and root development. Rootedplants with normal phenotypic characteristics were selected andtransferred to soil for growth and further assessment.

The R0 plants generated through the above transformation weretransferred to soil for growth and then selfed to produce R1 seed.During subsequent selfing of the R0 plants to produce the R1 generation,the unlinked insertions of T-DNA I (dmo expression cassette) and T-DNAII (cp4 epsps expression cassette) were segregated. A non-lethal dose ofglyphosate was applied to R1 plants. The plants with minor injuries wereselected for further analyses, whereas plants showing no injury, i.e.,containing T-DNA II (cp4 epsps expression cassette) were eliminated fromsubsequent development. Subsequently, R0 plants containing only a singleT-DNA I insert (i.e., dmo gene cassette) were identified. The T-DNA Iexpression cassette comprised the Peanut Chlorotic Streak Virus (PClSV)promoter with a duplicated enhancer region (P-PClSV.FLt-enh); operablylinked to a DNA leader derived from RNA transcript of Tobacco Etch Virus(L-TEV); operably linked to a DNA molecule encoding an N-terminalchloroplast transit peptide from ribulose 1,5-bisphosphate carboxylasesmall subunit (SSU) from Pisum sativum (TS-RbcS-3C); operably linked topart of the mature protein from ribulose 1,5-bisphosphate carboxylasesmall subunit (SSU) from Pisum sativum (CR-RbcS-3C); operably linked toa DNA molecule encoding a dicamba mono-oxygenase (DMO) fromStenotrophomonas maltophilia (Pseudomonas maltophilia was the originalname of the source of the DMO gene. This source organism wassubsequently reclassified first as Xanthomonas maltophilia and then asStenotrophomonas maltophilia); operably linked to a 3′ UTR DNA moleculederived from the ribulose 1,5-bisphosphate carboxylase small subunitgene of Pisum sativum (T-Ps.RbcS2-E9). Plants were selected by acombination of analytical techniques, including TaqMan, PCR analysis,and herbicide spray. The MON 87708 event was selected from amongapproximately 2,400 individual transgenic events based on its superiorphenotypic characteristics, a comprehensive molecular profile analysis,and its desirable haplotype association. Event MON 87708 was thencrossed with event MON 89788 (glyphosate tolerant). The progeny of thiscross were treated with dicamba (Clarity®, BASF, Research Triangle Park,N.C.), glyphosate (Roundup WeatherMAX®, Monsanto Co., St Louis, Mo.), ora combination of dicamba and glyphosate. The treatments were done atpre-plant, post-plant at the vegetative 3 growth stage (V3), andpost-plant at the reproduction 1 stage (R1). Treated plants were scoredfor percent growth inhibition at 14 days after treatment (DAT) for thepre-plant herbicide treatment, 3 DAT for post-emergence treatment at theVE stage, and 3 DAT post-emergence treatment at the R1 stage. Theherbicide(s) were applied at various rates per acre as shown in Table 1.Percent inhibition measurements represent an average of the repetitions.

TABLE 1 Dicamba and/or Roundup WeatherMAX ® tolerance testing withMON89788 × MON 87708 % % % inhibition inhibition inhibition at at 3 DATat 3 DAT Herbicide 14 DAT POST POST (a.e. Rate gm/ha (lb/a)) PRE (V3)(R1) Untreated/No herbicide 0.0 0.0 0.0 Roundup WeatherMAX ® 0.0 0.0 0.0(3364 (3.0)) Clarity ® (2244 (2.0)) 0.0 10.0 20.0 Clarity ® 561 (0.5)and Roundup 0.0 5.0 10.0 WeatherMAX ® (841 (0.75)) Clarity ® (1120(1.0)) and Roundup 0.0 7.5 12.5 WeatherMAX ® (1682 (1.5)) Clarity ®(2244 (2.0)) and Roundup 0.0 22.5 25.0 WeatherMAX ® (3364 (3.0))

The dicamba tolerance transgene was mapped in soybean event MON 87708 tolinkage group 9 at approximately map position 143.5. The associatedhaplotype window 19743 and 19767 has no effect on yield, maturity,height or lodging. Haplotype association information is provided inTable 2 where GM A92205 indicates event MON 87708.

TABLE 2 Haplotype association LG9, Pos 143.5 Haplotype HaplotypeHaplotype Linkage Event Window ID Yield Maturity Height Lodging sequencegroup GM_A92205 19743 1573355 0.00 −0.03 0.06 0.04 CGCTG 9 GM_A9220519743 1573357 0.00 0.07 −0.03 −0.04 CGCTA 9 GM_A92205 19743 1573371 0.00−0.09 −0.41 −0.09 CCCTG 9 GM_A92205 19743 1573373 0.00 −0.20 −0.01 −0.03TG*GG 9 GM_A92205 19743 1573374 0.00 −0.08 −0.07 0.05 TG*GA 9 GM_A9220519743 1573375 0.00 −0.15 0.05 0.04 CCCTA 9 GM_A92205 19743 1573376 0.00−0.45 −0.14 0.00 TC*GG 9 GM_A92205 19767 1573486 0.00 0.00 −0.03 0.00TACGGTC 9 GM_A92205 19767 1573493 0.00 0.00 0.22 0.00 AACAATT 9GM_A92205 19767 1573494 0.00 0.00 0.03 0.00 TACAATC 9 GM_A92205 197671573495 0.00 0.00 0.07 0.00 TGAAACC 9 GM_A92205 19767 1573497 0.00 0.000.41 0.00 TACGGTT 9 GM_A92205 19767 1573499 0.00 0.00 −0.01 0.00 TGAAACT9 GM_A92205 19767 1573500 0.00 0.00 0.06 0.00 TGAGACC 9 GM_A92205 197671573502 0.00 0.00 −0.07 0.00 AACAATC 9 GM_A92205 19767 1573503 0.00 0.000.08 0.00 AACGATC 9 GM_A92205 19767 1573504 0.00 0.00 0.07 0.00 TACAGTC9 GM_A92205 19767 1573506 0.00 0.00 −0.03 0.00 AACGATT 9 GM_A92205 197671573507 0.00 0.00 0.20 0.00 TGAAATT 9

Example 2 Characterization of MON 87708 DNA Sequences

The DNA inserted into the genome of soybean plant MON 87708 and theflanking sequence was characterized by detailed molecular analyses.These analyses included: the insert sequence, the insert number (numberof integration sites within the soybean genome), the copy number (numberof copies of transgene DNA within one locus), the integrity of theinserted gene cassette, the flanking sequences, and the association ofthe insertion with haplotype regions of the soybean genome.

Molecular DNA probes were used that included the intact coding regionand its respective regulatory elements, the promoters, introns, andpolyadenylation sequences of the plant expression cassettes. Theanalysis showed that MON 87708 contains a single transgene DNA insertionwith one copy of the expression cassette. Inverse PCR and DNA sequenceanalyses were performed to determine the 5′ and 3′ insert-to-plantgenome junctions, confirm the organization of the elements within theinsert (FIG. 1), and determine the complete DNA sequence of the insertin soybean plant MON 87708 (provided herein as SEQ ID NO: 5). A soybeanplant that comprises in its genome the linked transgene genetic elementsshown in FIG. 1 and is resistant to dicamba is an aspect of theinvention.

Sequences flanking the transgene DNA insertion in MON 87708 weredetermined using inverse PCR as described in Ochman et al., 1990 (PCRProtocols: A guide to Methods and Applications, Academic Press, Inc.)and/or genome walker techniques. Plant genomic DNA was isolated fromboth A3525 and the transgenic soybean lines from tissue grown understandard greenhouse conditions. Approximately 1 gram of young leaftissue was combined with liquid nitrogen and ground to a fine powderusing a mortar and pestle. DNA was extracted using a Nucleon™ PhytoPure™Genomic DNA extraction kit (RPN8511, Amersham, Piscataway, N.J.)according to the manufacturer's protocol. After the final precipitationstep, DNA was resuspended in 0.5 ml of TE (10 mM Tris-HCl pH 8.0, 1 mMEDTA). This method can be modified by one skilled in the art to extractDNA from any tissue of soybean, including, but not limited to seed. Analiquot of DNA was digested with restriction endonucleases selectedbased upon restriction analysis of the transgene DNA. Afterself-ligation of restriction fragments, PCR was performed using primersdesigned from the transgene DNA sequence that would amplify sequencesextending away from the 5′ and 3′ ends of the transgene DNA. PCRproducts were separated by agarose gel electrophoresis and purifiedusing a QIAGEN gel purification kit (Qiagen, Valencia, Calif.). Thesubsequent DNA products were sequenced directly using standard DNAsequencing protocols. The 5′ flanking sequence which extends into theright border sequence of the expression cassette transgene DNA ispresented as SEQ ID NO: 3 ([C], see FIG. 1). The 3′ flanking sequencewhich extends into the left border sequence of the expression cassettetransgene DNA is presented as SEQ ID NO: 4 ([D], see FIG. 1). Theportion of the expression cassette DNA that was fully integrated intothe A3525 genomic DNA is presented as SEQ ID NO: 5 ([E], see FIG. 1).

Isolated DNA molecule sequences were compared to the transgene DNAsequence to identify the flanking sequence and the co-isolated transgeneDNA fragment. Confirmation of the presence of the expression cassettewas achieved by PCR with primers designed based upon the deducedflanking sequence data and the known transgene DNA sequence. The wildtype sequence corresponding to the same region in which the transgeneDNA was integrated in the transformed line was isolated using primersdesigned from the flanking sequences in MON 87708. The PCR reactionswere performed using the Elongase® amplification system (Invitrogen,Carlsbad, Calif.). The flanking DNA sequences in MON 87708 and the A3525wild type sequence were analyzed against multiple nucleotide and proteindatabases. This information was used to examine the relationship of thetransgene to the plant genome and to look for the insertion siteintegrity. The flanking sequence and wild type sequences were used todesign primers for TAQMAN® endpoint assays used to identify the events.Zygosity assays were developed using this information.

Example 3 Event Specific Endpoint TAQMAN® Assays

This example describes an event specific endpoint TAQMAN® thermalamplification method developed to identify event MON 87708 in a sample.Examples of conditions useful with the event MON 87708 Specific EndpointTAQMAN® method are as follows: Step 1: 18 megohm water adjusted forfinal volume of 10 μl. Step 2: 5.0 μl of 2× Universal Master Mix (dNTPs,enzyme, buffer) to a 1× final concentration. Step 3: 0.5 μl EventPrimer-1 (SQ13570) and Event Primer-2 (SQ13571) Mix (resuspended in 18megohm water to a concentration of 20 uM for each primer) to 1.0 μMfinal concentration (for example in a microcentrifuge tube, thefollowing should be added to achieve 500 μl at a final concentration of20 uM: 100 μl of Primer SQ13570 (SEQ ID NO: 9) at a concentration of 100μM; 100 μl of Primer SQ13571 (SEQ ID NO: 10) at a concentration of 100μM; 300 μl of 18 megohm water). Step 4: 0.2 μl Event 6-FAM™ MGB ProbePB4655 (resuspended in 18 megohm water to a concentration of 10 μM (SEQID NO: 11) to 0.2 μM final concentration. Step 5: 0.5 μl InternalControl Primer-1 and Internal Control Primer-2 Mix (resuspended in 18megohm water to a concentration of 20 μM for each primer) to 1.0 μMfinal concentration. Step 6: 0.2 μl Internal Control VIC™ Probe to 0.2μM final concentration (resuspended in 18 megohm water to aconcentration of 10 μM) Step 7: 3.0 μl Extracted DNA (template) for eachsample with one each of the following comprising 1. Leaf Samples to beanalyzed; 2. Negative control (non-transgenic DNA); 3. Negative watercontrol (no template); 4. Positive control MON 87708 DNA. Step 8:Thermocycler Conditions as follows: One Cycle at 50° C. for 2 minutes;One Cycle at 95° C. for 10 minutes; Ten Cycles of 95° C. for 15 secondsthen 64° C. for 1 minute with −1° C./cycle; Thirty Cycles of 95° C. for15 seconds then 54° C. 1 minute; final cycle of 10° C.

The DNA primers used in the endpoint assay are primers SQ13570 (SEQ IDNO: 9), SQ13571 (SEQ ID NO: 10), and 6-FAM™ labeled probe PB4655 (SEQ IDNO: 11). 6-FAM™ is a fluorescent dye product of Applied Biosystems(Foster City, Calif.) attached to the DNA probe. For TAQMAN® MGB™probes, the 5′exonuclease activity of Taq DNA polymerase cleaves theprobe from the 5′-end, between the fluorophore and quencher. Whenhybridized to the target DNA strand, quencher and fluorophore areseparated enough to produce a fluorescent signal, thus releasingfluorescence. SQ13570 (SEQ ID NO: 9) and SQ13571 (SEQ ID NO: 10) whenused with these reaction methods with PB4655 (SEQ ID NO: 11) produce aDNA amplicon that is diagnostic for event MON 87708 DNA. The controlsfor this analysis should include a positive control from soybeancontaining event MON 87708 DNA, a negative control from non-transgenicsoybean, and a negative control that contains no template DNA.Additionally, a control for the PCR reaction includes Internal ControlPrimers and an Internal Control Probe, specific to a single copy gene inthe Glycine genome. One of skill in the art will know how to designprimers specific to a single copy gene in the Glycine genome. Theseassays are optimized for use with either an Applied Biosystems GeneAmp®PCR System 9700 (run at maximum speed) or MJ Research DNA Engine PTC-225thermal cycler. Other methods and apparatus known to those skilled inthe art that produce amplicons that identify the event MON 87708 DNA iswithin the skill of the art.

R0 plants demonstrating the presence of the expression cassette wereallowed to develop into fully mature plants. Probes designed based onthe sequences of the dicamba tolerance transgene cassette were used toprobe Southern blots to determine linkage. The R0 plants were alsoevaluated for copy number of the expression cassette using a combinationof Southern analysis and endpoint TAQMAN®.

A zygosity assay is useful for determining if a plant comprising anevent is homozygous for the event DNA; that is comprising the exogenousDNA in the same location on each chromosome of a chromosomal pair; orheterozygous for an event DNA, that is comprising the exogenous DNA ononly one chromosome of a chromosomal pair; or is null for the event DNA,that is wildtype. The endpoint TAQMAN® thermal amplification method wasalso used to develop zygosity assays for event MON 87708. This exampledescribes an event specific endpoint TAQMAN® thermal amplificationmethod developed to determine the zygosity of event MON 87708 in asample. For this assay, a three primer assay was employed wherein primerSQ20632 (SEQ ID NO: 12) hybridizes and extends specifically from the 3′junction of the inserted exogenous DNA and genomic DNA, primer SQ20636(SEQ ID NO: 13) hybridizes and extends specifically from the DNAflanking the 3′ side of the inserted exogenous DNA, and primer SQ20637(SEQ ID NO: 14) hybridizes and extends specifically from genomic DNAinto which was integrated the inserted exogenous DNA. The three primersare diagnostic for the event. In this example, primer SQ20636 (SEQ IDNO: 13) and primer SQ20632 (SEQ ID NO: 12) and the 6-FAM™-labeledoligonucleotide probe PB10130 (SEQ ID NO: 15) are diagnostic when thereis a copy of the inserted exogenous DNA. In this example, SQ20636 (SEQID NO: 13) and primer SQ20637 (SEQ ID NO: 14) and the VIC™-labeledoligonucleotide probe PB10131 (SEQ ID NO: 16) are diagnostic when thereis no copy of the inserted exogenous DNA present in the genomic DNA,i.e. wildtype. When the three primers and two probes are mixed togetherin a PCR reaction with DNA extracted from a plant homozygous for eventMON 87708, there is a fluorescent signal only from the 6-FAM™-labeledoligonucleotide probe PB10130 (SEQ ID NO: 15) which is indicative of anddiagnostic a plant homozygous for event MON 87708. When the threeprimers and two probes are mixed together in a PCR reaction with DNAextracted from a plant heterozygous for event MON 87708, there is afluorescent signal from both the 6-FAM™-labeled oligonucleotide probePB10130 (SEQ ID NO: 15) and the VIC™-labeled oligonucleotide probePB10131 (SEQ ID NO: 16) which is indicative of and diagnostic a plantheterozygous for event MON 87708. When the three primers and two probesare mixed together in a PCR reaction with DNA extracted from a plantwhich is null for event MON 87708 (i.e. wildtype), there is afluorescent signal from only the VIC™-labeled oligonucleotide probePB10131 (SEQ ID NO: 16) which is indicative of and diagnostic a plantnull for event MON 87708, i.e. wildtype. Examples of conditions usefulwith this method are as follows. Step 1: 18 megohm water adjusted forfinal volume of 10 μl. Step 2: 5.0 μl of 2× Universal Master Mix(Applied Biosystems cat #4304437; dNTPs, enzyme, buffer) to a 1× finalconcentration. Step 3: 0.5 μl of Zygosity Primers SQ20632, SQ20636,SQ20637 (resuspended in 18 megohm water to a concentration of 20 μM foreach primer) to a final concentration of 1.0 μM. Step 4: 0.2 μl 6-FAM™Probe PB10130 (SEQ ID NO: 15) (resuspended in 18 megohm water to aconcentration of 10 μM) to 0.2 μM final concentration. Step 5: 0.2 μlVIC™ Probe PB10131 (SEQ ID NO: 16) (resuspended in 18 megohm water to aconcentration of 10 μM) to 0.2 μM final concentration. Step 6: 3.0 μlExtracted DNA (template) for each sample with one each of the followingcomprising 1. Leaf Samples to be analyzed (4-80 ng of genomic DNAdiluted in water); 2. Negative control (non-transgenic soybean DNA; 4 ngdiluted in water); 3. Negative water control (no template; solution inwhich DNA was resuspended); 4. Positive control MON 87708 genomic DNAfrom known heterozygous event (4 ng diluted in water); 5. 4. Positivecontrol MON 87708 genomic DNA from known homozygous event (4 ng dilutedin water). Step 7: Gently mix. Step 8: Thermocycler Conditions whenusing Applied Biosystems GeneAmp® PCR System 9700 (run at maximum speed)or MJ Research DNA Engine PTC-225 thermal cycler are as follows: OneCycle at 50° C. for 2 minutes; one cycle at 95° C. for 10 minutes; TenCycles of (95° C. for 15 seconds then 64° C. for 1 minute (−1°C./cycle); Thirty Cycles of (95° C. for 15 seconds then 54° C. for 1minute); Optional additional 10 to 20 cycles (95° C. for 15 seconds then64° C. for 1 minute (−1° C./cycle) may provide more distinct populationseparation during EndPoint TaqMan® analysis; One cycle at 10° C. hold.

Example 4 Identification of Event MON 87708 in any MON 87708 BreedingActivity

The following example describes how one may identify the MON 87708 eventwithin progeny of any breeding activity using soybean event MON 87708.

DNA event primer pairs are used to produce an amplicon diagnostic forsoybean event MON 87708. An amplicon diagnostic for MON 87708 comprisesat least one junction sequence, provided as SEQ ID NO: 1 or SEQ ID NO: 2or SEQ ID NO: 7 or SEQ ID NO: 8. Event primer pairs that will produce adiagnostic amplicon for MON 87708 include primer pairs based upon theflanking sequences and the inserted expression cassette. To acquire adiagnostic amplicon in which SEQ ID NO: 1 is found, one would design aforward primer molecule based upon SEQ ID NO: 3 from bases 1 through1126 and a reverse primer molecule based upon the inserted expressioncassette DNA sequence (SEQ ID NO: 5 from positions 1 through 3003) inwhich the primer molecules are of sufficient length of contiguousnucleotides to specifically hybridize to SEQ ID NO: 3 and SEQ ID NO: 5.To acquire a diagnostic amplicon in which SEQ ID NO: 2 is found, onewould design a forward primer molecule based upon the insertedexpression cassette DNA sequence (SEQ ID NO: 5 from positions 1 through3003) and a reverse primer molecule based upon the 3′ flanking sequence(SEQ ID NO: 4 from bases 131 through 1947), in which the primermolecules are of sufficient length of contiguous nucleotides tospecifically hybridize to SEQ ID NO: 4 and SEQ ID NO: 5. For practicalpurposes, one should design primers which produce amplicons of a limitedsize range, for example, between 100 to 1000 bases. Smaller (shorterpolynucleotide length) sized amplicons in general are more reliablyproduced in PCR reactions, allow for shorter cycle times, and can beeasily separated and visualized on agarose gels or adapted for use inendpoint TAQMAN®-like assays. Smaller amplicons can be produced anddetected by methods known in the art of DNA amplicon detection. Inaddition, amplicons produced using the primer pairs can be cloned intovectors, propagated, isolated, and sequenced or can be sequenceddirectly with methods well established in the art. Any primer pairderived from the combination of SEQ ID NO: 3 and SEQ ID NO: 5 or thecombination of SEQ ID NO: 4 and SEQ ID NO: 5 that are useful in a DNAamplification method to produce an amplicon diagnostic for MON 87708 orprogeny thereof is an aspect of the invention. Any single isolated DNApolynucleotide primer molecule comprising at least 11 contiguousnucleotides of SEQ ID NO: 3, or its complement that is useful in a DNAamplification method to produce an amplicon diagnostic for MON 87708 orprogeny thereof is an aspect of the invention. Any single isolated DNApolynucleotide primer molecule comprising at least 11 contiguousnucleotides of SEQ ID NO: 4, or its complement that is useful in a DNAamplification method to produce an amplicon diagnostic for MON 87708 orprogeny thereof is an aspect of the invention. Any single isolated DNApolynucleotide primer molecule comprising at least 11 contiguousnucleotides of SEQ ID NO: 5, or its complement that is useful in a DNAamplification method to produce an amplicon diagnostic for MON 87708 orprogeny thereof is an aspect of the invention.

An example of the amplification conditions for this analysis isillustrated in Example 3. However, any modification of these methods orthe use of DNA primers homologous or complementary to SEQ ID NO: 3 orSEQ ID NO: 4 or DNA sequences of the genetic elements contained in thetransgene insert (SEQ ID NO: 5) of MON 87708 that produce an amplicondiagnostic for MON 87708 is within the art. A diagnostic ampliconcomprises a DNA molecule homologous or complementary to at least onetransgene/genomic junction DNA (SEQ ID NO: 1 or SEQ ID NO: 2 or SEQ IDNO: 7 or SEQ ID NO: 8), or a substantial portion thereof.

An analysis for event MON 87708 plant tissue sample should include apositive tissue control from event MON 87708, a negative control from asoybean plant that is not event MON 87708 (for example, but not limitedto A3525), and a negative control that contains no soybean genomic DNA.A primer pair that will amplify an endogenous soybean DNA molecule willserve as an internal control for the DNA amplification conditions.Additional primer sequences can be selected from SEQ ID NO: 3, SEQ IDNO: 4, or SEQ ID NO: 5 by those skilled in the art of DNA amplificationmethods, and conditions selected for the production of an amplicon bythe methods shown in Example 3 may differ, but result in an amplicondiagnostic for event MON 87708 DNA. The use of these DNA primersequences with modifications to the methods of Example 3 are within thescope of the invention. The amplicon produced by at least one DNA primersequence derived from SEQ ID NO: 3, SEQ ID NO: 4, or SEQ ID NO: 5 thatis diagnostic for MON 87708 is an aspect of the invention.

DNA detection kits contain at least one DNA primer of sufficient lengthof contiguous nucleotides derived from SEQ ID NO: 3, SEQ ID NO: 4, orSEQ ID NO: 5, that when used in a DNA amplification method produces adiagnostic amplicon for MON 87708 or its progeny is an aspect of theinvention. A MON 87708 soybean plant, plant part, plant cell, seed, orcommodity product that will produce an amplicon diagnostic for MON 87708when tested in a DNA amplification method is an aspect of the invention.The assay for the MON 87708 amplicon can be performed by using anApplied Biosystems GeneAmp® PCR System 9700 (run at maximum speed) or MJResearch DNA Engine PTC-225 thermal cycler or any other amplificationsystem that can be used to produce an amplicon diagnostic of MON 87708as shown in Example 3.

A deposit of a representative sample of soybean event MON 87708 seeddisclosed above and recited in the claims has been made under theBudapest Treaty with the American Type Culture Collection (ATCC), 10801University Boulevard, Manassas, Va. 20110. The ATCC accession number forthis deposit is PTA-9670. The deposit will be maintained in thedepository for a period of 30 years, or 5 years after the last request,or for the effective life of the patent, whichever is longer, and willbe replaced as necessary during that period.

Having illustrated and described the principles of the invention, itshould be apparent to persons skilled in the art that the invention canbe modified in arrangement and detail without departing from suchprinciples. We claim all modifications that are within the spirit andscope of the appended claims.

1-29. (canceled)
 30. A soybean haplotype region on linkage group 9 atapproximately map position 143.5 comprising a dicamba tolerance gene andfurther defined by haplotype window 19743 and 19767.